Reference allele is: Major
P-values for top 5 SNPs
| Position | JointP | 68_specificP | 1012_sepecificP | 24_specificP |
|---|
| 18067225 | 3.09260885085198e-09 | 0.228859875837104 | 0.107587943678707 | 0.00375084283277536 |
|---|
| 18067184 | 0.169197527096689 | 0.730192314322229 | 0.000348940584083481 | 2.08356521049652e-07 |
|---|
| 18067160 | 0.102637968545261 | 0.518438775474447 | 0.00875777731610263 | 1.72810893362834e-06 |
|---|
| 18067116 | 5.60404024078092e-06 | 0.170565852131633 | 0.00992299686720015 | 0.0323762476084299 |
|---|
| 18066920 | 1.88954491688334e-05 | 0.39744936607909 | 0.00337866415755537 | 0.0473506315534443 |
|---|
Genotype info for top 5 SNPs
| #CHROM | POS | ID | REF | ALT | QUAL | FILTER | INFO | FORMAT | DGRP-021 | DGRP-026 | DGRP-028 | DGRP-031 | DGRP-032 | DGRP-038 | DGRP-040 | DGRP-041 | DGRP-042 | DGRP-045 | DGRP-048 | DGRP-049 | DGRP-057 | DGRP-059 | DGRP-069 | DGRP-073 | DGRP-075 | DGRP-083 | DGRP-085 | DGRP-088 | DGRP-091 | DGRP-093 | DGRP-100 | DGRP-101 | DGRP-105 | DGRP-109 | DGRP-129 | DGRP-136 | DGRP-138 | DGRP-142 | DGRP-149 | DGRP-153 | DGRP-158 | DGRP-161 | DGRP-176 | DGRP-177 | DGRP-181 | DGRP-189 | DGRP-195 | DGRP-208 | DGRP-217 | DGRP-223 | DGRP-227 | DGRP-228 | DGRP-229 | DGRP-233 | DGRP-235 | DGRP-237 | DGRP-239 | DGRP-256 | DGRP-280 | DGRP-287 | DGRP-301 | DGRP-303 | DGRP-304 | DGRP-306 | DGRP-307 | DGRP-309 | DGRP-310 | DGRP-313 | DGRP-315 | DGRP-317 | DGRP-318 | DGRP-319 | DGRP-320 | DGRP-321 | DGRP-324 | DGRP-325 | DGRP-332 | DGRP-335 | DGRP-336 | DGRP-338 | DGRP-340 | DGRP-348 | DGRP-350 | DGRP-352 | DGRP-354 | DGRP-355 | DGRP-356 | DGRP-357 | DGRP-358 | DGRP-359 | DGRP-360 | DGRP-361 | DGRP-362 | DGRP-365 | DGRP-367 | DGRP-370 | DGRP-371 | DGRP-373 | DGRP-374 | DGRP-375 | DGRP-377 | DGRP-379 | DGRP-380 | DGRP-381 | DGRP-382 | DGRP-383 | DGRP-385 | DGRP-386 | DGRP-390 | DGRP-391 | DGRP-392 | DGRP-395 | DGRP-397 | DGRP-399 | DGRP-405 | DGRP-406 | DGRP-409 | DGRP-426 | DGRP-427 | DGRP-437 | DGRP-439 | DGRP-440 | DGRP-441 | DGRP-443 | DGRP-461 | DGRP-486 | DGRP-491 | DGRP-492 | DGRP-502 | DGRP-505 | DGRP-508 | DGRP-509 | DGRP-513 | DGRP-517 | DGRP-528 | DGRP-530 | DGRP-531 | DGRP-535 | DGRP-551 | DGRP-555 | DGRP-559 | DGRP-563 | DGRP-566 | DGRP-584 | DGRP-589 | DGRP-595 | DGRP-596 | DGRP-627 | DGRP-630 | DGRP-634 | DGRP-639 | DGRP-642 | DGRP-646 | DGRP-703 | DGRP-705 | DGRP-707 | DGRP-712 | DGRP-714 | DGRP-716 | DGRP-721 | DGRP-727 | DGRP-730 | DGRP-732 | DGRP-737 | DGRP-738 | DGRP-748 | DGRP-757 | DGRP-761 | DGRP-765 | DGRP-774 | DGRP-776 | DGRP-783 | DGRP-786 | DGRP-787 | DGRP-790 | DGRP-796 | DGRP-799 | DGRP-801 | DGRP-802 | DGRP-804 | DGRP-805 | DGRP-808 | DGRP-810 | DGRP-812 | DGRP-818 | DGRP-819 | DGRP-820 | DGRP-821 | DGRP-822 | DGRP-832 | DGRP-837 | DGRP-843 | DGRP-849 | DGRP-850 | DGRP-852 | DGRP-853 | DGRP-855 | DGRP-857 | DGRP-859 | DGRP-861 | DGRP-879 | DGRP-882 | DGRP-884 | DGRP-887 | DGRP-890 | DGRP-892 | DGRP-894 | DGRP-897 | DGRP-900 | DGRP-907 | DGRP-908 | DGRP-911 | DGRP-913 |
|---|
| chr2R | 18067225 | . | C | A | . | PASS | AC=9 | GT | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/0 | 0/0 | 0/0 |
|---|
| chr2R | 18067184 | . | C | G | . | PASS | AC=54 | GT | 1/1 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 1/1 | 0/0 | 1/1 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 1/1 | 0/0 | 1/1 | 1/1 | 0/0 | 0/0 | 0/0 | 1/1 | 1/1 | 0/0 | 1/1 | 1/1 | 0/0 | 0/1 | 0/0 | 0/0 | 0/0 | 0/1 | 0/0 | 0/0 | 0/0 | 0/1 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 1/1 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 1/1 | 1/1 | 0/0 | 1/1 | 0/0 | 1/1 | 0/0 | 1/1 | 1/1 | 1/1 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/1 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 1/1 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 1/1 | 0/0 |
|---|
| chr2R | 18067160 | . | T | TCGATTGGCTTTAATTATTGCTTTCCAGCACTTTTATTAGGTCGTAAGCATGTTGGAAACGCATATCACAGAAGTCATCTTGGCATGCTACACACTGCTCCAGGAGCAGCTGCAGCTTTTCGTTGTCCAAATTCTTAAGCAAGTAATCCCTTAGCAAAAGGCACGCCTGGTAGATATTGGCATCCAGCTGATGGCCGGAGCAGAATGCAGAGACATCAAATGTGAATCCCTCGCCGGTCAGCGGCTCGTACTTTTCGGCATGTCCTGCTGCGAACGAAGCGTCCACCAGGACCACGGAGTCCAAATCAATGAGGTACACCTTCTTGGTGTCTTCGTCGTAAGCCAAATTATCGGCCGTGAAATCGGTTAAGATAATGCGAAAGTCCGCGAATCCAAAAGTCAGCTTGAGGGAGAGCTGGATCAACTGGAGAGCCAGCTCCACACGCAAACCTTCTTCAGCATCGACGTAATGAGCTAAAGTACGTCCTGCATTGGATTGAAAATGTGTTAGTCCGCAGGAGGCGTAGGTGGTAGGCACTGGAAATCCCTGCAGATGCAGTTCCTGCATAAGCAGCGGACTAACGTAGTACATCATGTAGAACCACACACTGGCGGCAGCATGTCCACGCTGCTCCAAGTACGAAACAAAGCGGGGTTCCCTTGCCAGAGTTCGGCAGAGATGAAAACCACCAGGTCGCTCCTCTAGTTCATAGAAATCTTTTTTCACATTTTTTATCTGATTACTCTGTGCATCAATGATTTTTCTTTTGGCCACCAGCTGGACTTCCTGATCCCGGTCTTTTAGCCTTAGAAAGTAAATCGCTCGGCGATCAACGAGCAACGAAATGGCTTTCACAAGTCTACTCCAATCCGAGGGCTCTGCAATTTTCTGGAAGATTTCCCCGCACGGCTCACTCTGTCCAACGAAACAGTCTGGACACAAGCGCAGATCCTTCTCGAAAAGTTCCTGGAACACCTCTCGCTGCGGCTTCACCTGCAGCTCCTGCAGCAGGGCCAAAATGAGCACCACTTTCAGTTGGCCGTGTGACAGGTGCATCACAGGGAGCTGCAAAGAGACGGAAGAGAAACGAATGAAGGGGCTTGCCAAACAACAGAAGAAGCCACACGTGTGTGTATCCAAAGAAATGTGCGTGAGGGCCCAGCCTCCAGTCCACTGGCCACATTACCTGTTTGGCAGCTACACGCCAAAAGTGAACCTAAGCACCGAGCCAAAGAGGCAGCTGGTTATGACCGCTTAACGAAGCGTCTATACCCTTTCGCTACATTTAGTTTAATTTGCTATTAAGCTGTATGTATTTTAAGTATGGAATTTCCCTTTTTACTAGTTCCTAAAAGCAATACCAAATGCTTCCATTTATTCTATTATATTTTTTAAGCACGTCTAAGTTATAGATCTTTAATTTAGTCATGATGACAGCTGATTAGATTATGATACCACTATCGCTTTTATCACACCAGCTTCTGGGCTCATGCCGAAATGGTTATCCCACAAGGTCCGAAGAGTATGGCGTCGGGGGGACGGACTTACAGAAATAACTTTGGTTCTGAAGAAGAGCCAATTCAATGGGTTCAAGGTTGGCCATCACGCTGGGAGCAAGAAGCGAATCAGACGCTTAATTTGTAATCTCTGCAGAGGTGGGAGAGTAGCCATTATGGCGATACCAGTCGCATCCTCCAAGACGCACTCCATCTCGCCTTGCCCTGTACTTCAAAATTAAGTGTGCCCAGAATGGACTTGCTCTGTGGCTCATTCTTTGGCGACGACGAGGAGCATAATGACTCGGCTAAAGATTCAGCACCATTGCCCACGACTTCGCCAGTGCCTCAGACTATCAAAAGAAAATCGCGTGTAAGATTTAGCCGCAGCACCATACGAAAACTCCAACTCAACGAACTGGAACAGTTGGGCTCCACAAACGCCTTTTTCAACTTCCTGCTCGCCCAGCGAATTCGGGAATTGGGCTTGGTCGGTCTCAACTACCTGGATGTGTTCAAGTCCCAGCGACTAATTTCGGGGAAACGCATCTGGAACTGCATGTATGAGTTGGCTGAAAGTGTTCGTCAGAACGATATTTAAACCTTTCGGGATAAGAGGAAACTCGATGAAATCGTCTACCAAATGTATTCGTGCGAAAAAAGACCGAAGATCGCTGAGAACGCACTGAGAGATTGGGAGACGCAGCAGAGGAGGAGAGACCTGAAAT | . | PASS | AC=154 | GT | 0/0 | 1/0 | 1/0 | 0/0 | 1/0 | 1/0 | 0/0 | 1/0 | 0/0 | 0/0 | 1/0 | 1/0 | 1/0 | 1/1 | 1/0 | 1/0 | 0/0 | 0/0 | 1/0 | 1/0 | 1/0 | 1/1 | 1/0 | 1/1 | 0/0 | 1/0 | 1/1 | 0/0 | 1/0 | 1/0 | 1/0 | 0/0 | 1/0 | 1/0 | 0/0 | 1/1 | 1/0 | 1/0 | 0/0 | 1/0 | 1/0 | 1/0 | 0/0 | 1/0 | 1/0 | 0/0 | 1/1 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 0/0 | 1/0 | 1/0 | 1/0 | 1/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 1/0 | 1/0 | 1/0 | 0/0 | 0/0 | 1/0 | 0/0 | 0/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/1 | 0/1 | 1/1 | 1/0 | 1/0 | 0/1 | 1/0 | 1/0 | 0/0 | 1/0 | 1/0 | 1/0 | 1/0 | 0/0 | 1/0 | 0/0 | 1/1 | 0/0 | 1/0 | 1/0 | 1/0 | 0/0 | 0/0 | 1/0 | 0/0 | 1/0 | 0/0 | 1/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 0/0 | 1/0 | 1/1 | 0/0 | 1/1 | 1/0 | 0/0 | 1/0 | 1/1 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 0/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/1 | 1/0 | 0/0 | 1/0 | 1/0 | 1/1 | 0/0 | 1/0 | 1/0 | 1/1 | 1/0 | 1/0 | 0/0 | 1/0 | 1/0 | 0/0 | 0/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 0/0 | 1/0 | 1/0 | 1/0 | 1/0 | 1/0 | 0/0 | 1/0 | 1/1 | 1/0 | 0/0 | 1/1 | 1/0 | 1/0 | 1/0 | 1/0 | 0/0 | 1/0 | 1/1 | 1/0 | 1/0 | 1/0 | 1/0 | 1/1 | 1/0 | 1/0 | 0/0 | 1/1 | 1/0 | 1/0 | 0/0 | 1/1 | 0/0 | 1/0 |
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| chr2R | 18067116 | . | C | T | . | PASS | AC=15 | GT | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 |
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| chr2R | 18066920 | . | TT | T | . | PASS | AC=21 | GT | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 1/1 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 1/1 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/0 | 1/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/0 | 0/0 | 0/0 | 0/0 | 1/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 1/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 |
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Sequences and list of disrupted MOTIFs around top 5 SNPs
| Chr | Position | Sequence | Motifs |
|---|
| chr2R | 18067225 | CAGTTGAAGGTGGCGCGTTGCGCTCGACGGTTGTCGCTATTCTGGTTCTCG | |
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| chr2R | 18067184 | TCGAAATCGCTTGGAGAACGTTTCCCCAAACCGAGTAAGATCAGTTGAAGG | |
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| chr2R | 18067160 | CAGCAGAGGAGGAGAGACCTGAAATCGAAATCGCTTGGAGAACGTTTCCCC | Dmelanogaster-FlyFactorSurvey-ab_SOLEXA_5_FBgn0259750 , Dmelanogaster-FlyFactorSurvey-ac_da_SANGER_5_FBgn0000022 , Dmelanogaster-FlyFactorSurvey-ac_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-ase_da_SANGER_10_FBgn0000137 , Dmelanogaster-FlyFactorSurvey-ase_da_SANGER_10_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-ato_da_SANGER_10_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-ato_da_SANGER_10_FBgn0010433 , Dmelanogaster-FlyFactorSurvey-ato_da_SANGER_5_2_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-ato_da_SANGER_5_2_FBgn0010433 , Dmelanogaster-FlyFactorSurvey-Blimp.1_SANGER_5_FBgn0035625 , Dmelanogaster-FlyFactorSurvey-bowl_SANGER_5_FBgn0004893 , Dmelanogaster-FlyFactorSurvey-br_SANGER_10_FBgn0000210 , Dmelanogaster-FlyFactorSurvey-Cf2.PB_SANGER_5_FBgn0000286 , Dmelanogaster-FlyFactorSurvey-CG15601_SANGER_5_FBgn0030673 , Dmelanogaster-FlyFactorSurvey-CG16778_SANGER_5_FBgn0003715 , Dmelanogaster-FlyFactorSurvey-CG3065_F1.3_SOLEXA_2.5_FBgn0034946 , Dmelanogaster-FlyFactorSurvey-CG31670_SANGER_5_FBgn0031375 , Dmelanogaster-FlyFactorSurvey-CG4404_SANGER_5_FBgn0030432 , Dmelanogaster-FlyFactorSurvey-CG9895_SANGER_10_FBgn0034810 , Dmelanogaster-FlyFactorSurvey-cic_SANGER_5_FBgn0028386 , Dmelanogaster-FlyFactorSurvey-crp_SANGER_10_FBgn0001994 , Dmelanogaster-FlyFactorSurvey-da_SANGER_10_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-Dip3_SANGER_5_FBgn0040465 , Dmelanogaster-FlyFactorSurvey-dl_FlyReg_FBgn0000462 , Dmelanogaster-FlyFactorSurvey-dl_NBT_FBgn0000462 , Dmelanogaster-FlyFactorSurvey-dsf_SANGER_5_FBgn0015381 , Dmelanogaster-FlyFactorSurvey-Eip74EF_FlyReg_FBgn0000567 , Dmelanogaster-FlyFactorSurvey-esg_SANGER_2.5_FBgn0001981 , Dmelanogaster-FlyFactorSurvey-Espl_FlyReg_FBgn0000591 , Dmelanogaster-FlyFactorSurvey-Fer1_da_SANGER_10_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-Fer1_da_SANGER_10_FBgn0037475 , Dmelanogaster-FlyFactorSurvey-Fer3_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-Fer3_da_SANGER_5_FBgn0037937 , Dmelanogaster-FlyFactorSurvey-ftz.f1_FlyReg_FBgn0001078 , Dmelanogaster-FlyFactorSurvey-gl_SOLEXA_5_FBgn0004618 , Dmelanogaster-FlyFactorSurvey-her_SANGER_10_FBgn0001185 , Dmelanogaster-FlyFactorSurvey-HLH4C_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-HLH4C_da_SANGER_5_FBgn0011277 , Dmelanogaster-FlyFactorSurvey-Hsf_FlyReg_FBgn0001222 , Dmelanogaster-FlyFactorSurvey-jim_F1.9_SOLEXA_2.5_FBgn0027339 , Dmelanogaster-FlyFactorSurvey-klu_SANGER_10_FBgn0013469 , Dmelanogaster-FlyFactorSurvey-klu_SOLEXA_5_FBgn0013469 , Dmelanogaster-FlyFactorSurvey-l(1)sc_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-l(1)sc_da_SANGER_5_FBgn0002561 , Dmelanogaster-FlyFactorSurvey-Met_Clk_SANGER_5_FBgn0002723 , Dmelanogaster-FlyFactorSurvey-Met_Clk_SANGER_5_FBgn0023076 , Dmelanogaster-FlyFactorSurvey-nau_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-nau_da_SANGER_5_FBgn0002922 , Dmelanogaster-FlyFactorSurvey-pad_SOLEXA_5_FBgn0038418 , Dmelanogaster-FlyFactorSurvey-pdm3_SOLEXA_5_FBgn0033288 , Dmelanogaster-FlyFactorSurvey-pho_FlyReg_FBgn0002521 , Dmelanogaster-FlyFactorSurvey-pho_SOLEXA_5_FBgn0002521 , Dmelanogaster-FlyFactorSurvey-sage_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-sage_da_SANGER_5_FBgn0037672 , Dmelanogaster-FlyFactorSurvey-sc_da_SANGER_10_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-sc_da_SANGER_10_FBgn0004170 , Dmelanogaster-FlyFactorSurvey-shn.F1.2_SANGER_5_FBgn0003396 , Dmelanogaster-FlyFactorSurvey-Side_SANGER_5_FBgn0032741 , Dmelanogaster-FlyFactorSurvey-sna_SANGER_10_FBgn0003448 , Dmelanogaster-FlyFactorSurvey-sna_SOLEXA_5_FBgn0003448 , Dmelanogaster-FlyFactorSurvey-sob_SANGER_10_FBgn0004892 , Dmelanogaster-FlyFactorSurvey-sob_SOLEXA_5_FBgn0004892 , Dmelanogaster-FlyFactorSurvey-tai_Clk_SANGER_5_FBgn0023076 , Dmelanogaster-FlyFactorSurvey-tai_Clk_SANGER_5_FBgn0041092 , Dmelanogaster-FlyFactorSurvey-tap_da_SANGER_5_2_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-tap_da_SANGER_5_2_FBgn0015550 , Dmelanogaster-FlyFactorSurvey-ttk_FlyReg_FBgn0003870 , Dmelanogaster-FlyFactorSurvey-wor_SANGER_2.5_FBgn0001983 , Dmelanogaster-FlyFactorSurvey-wor_SOLEXA_2.5_FBgn0001983 , Dmelanogaster-JASPAR_2014-STAT92E-MA0532.1 , Dmelanogaster-JASPAR_CORE-bap-MA0211.1 |
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| chr2R | 18067116 | AAAGACCGAAGATCGCTGAGAACGCACTGAGAGATTGGGAGACGCAGCAGA | |
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| chr2R | 18066920 | GCCCAGCGAATTCGGGAATTGGGCTTGGTCGGTCTCAACTACCTGGATGTG | Dmelanogaster-FlyFactorSurvey-CG3065_F1.3_SOLEXA_2.5_FBgn0034946 , Dmelanogaster-FlyFactorSurvey-CG9895_SANGER_10_FBgn0034810 |
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