Reference allele is: Major

P-values for top 5 SNPs

PositionJointP68_specificP1012_sepecificP24_specificP
199169068.24659866023312e-080.0684240622875520.4227261137575610.743814870424277
199169071.27599454838367e-070.09808272424784050.4112993226638780.740294700253817
199174751.61337352143833e-060.1041235591758060.08849230328095350.792768444182925
199170793.27802937251267e-060.1413915913222250.9572582354453650.268881324622077
199168305.37698744217041e-060.3205544419541550.7527435729021320.500295250522747

Genotype info for top 5 SNPs

#CHROMPOSIDREFALTQUALFILTERINFOFORMATDGRP-021DGRP-026DGRP-028DGRP-031DGRP-032DGRP-038DGRP-040DGRP-041DGRP-042DGRP-045DGRP-048DGRP-049DGRP-057DGRP-059DGRP-069DGRP-073DGRP-075DGRP-083DGRP-085DGRP-088DGRP-091DGRP-093DGRP-100DGRP-101DGRP-105DGRP-109DGRP-129DGRP-136DGRP-138DGRP-142DGRP-149DGRP-153DGRP-158DGRP-161DGRP-176DGRP-177DGRP-181DGRP-189DGRP-195DGRP-208DGRP-217DGRP-223DGRP-227DGRP-228DGRP-229DGRP-233DGRP-235DGRP-237DGRP-239DGRP-256DGRP-280DGRP-287DGRP-301DGRP-303DGRP-304DGRP-306DGRP-307DGRP-309DGRP-310DGRP-313DGRP-315DGRP-317DGRP-318DGRP-319DGRP-320DGRP-321DGRP-324DGRP-325DGRP-332DGRP-335DGRP-336DGRP-338DGRP-340DGRP-348DGRP-350DGRP-352DGRP-354DGRP-355DGRP-356DGRP-357DGRP-358DGRP-359DGRP-360DGRP-361DGRP-362DGRP-365DGRP-367DGRP-370DGRP-371DGRP-373DGRP-374DGRP-375DGRP-377DGRP-379DGRP-380DGRP-381DGRP-382DGRP-383DGRP-385DGRP-386DGRP-390DGRP-391DGRP-392DGRP-395DGRP-397DGRP-399DGRP-405DGRP-406DGRP-409DGRP-426DGRP-427DGRP-437DGRP-439DGRP-440DGRP-441DGRP-443DGRP-461DGRP-486DGRP-491DGRP-492DGRP-502DGRP-505DGRP-508DGRP-509DGRP-513DGRP-517DGRP-528DGRP-530DGRP-531DGRP-535DGRP-551DGRP-555DGRP-559DGRP-563DGRP-566DGRP-584DGRP-589DGRP-595DGRP-596DGRP-627DGRP-630DGRP-634DGRP-639DGRP-642DGRP-646DGRP-703DGRP-705DGRP-707DGRP-712DGRP-714DGRP-716DGRP-721DGRP-727DGRP-730DGRP-732DGRP-737DGRP-738DGRP-748DGRP-757DGRP-761DGRP-765DGRP-774DGRP-776DGRP-783DGRP-786DGRP-787DGRP-790DGRP-796DGRP-799DGRP-801DGRP-802DGRP-804DGRP-805DGRP-808DGRP-810DGRP-812DGRP-818DGRP-819DGRP-820DGRP-821DGRP-822DGRP-832DGRP-837DGRP-843DGRP-849DGRP-850DGRP-852DGRP-853DGRP-855DGRP-857DGRP-859DGRP-861DGRP-879DGRP-882DGRP-884DGRP-887DGRP-890DGRP-892DGRP-894DGRP-897DGRP-900DGRP-907DGRP-908DGRP-911DGRP-913
chr3L19916906.CT.PASSAC=66GT0/01/01/00/10/00/00/00/00/01/01/10/00/01/10/10/01/00/00/00/01/01/10/00/00/00/00/00/01/10/01/10/00/00/01/10/00/00/00/00/00/00/00/00/01/10/00/01/11/01/10/00/00/00/01/10/01/10/00/01/00/00/01/00/00/00/01/10/00/00/00/00/00/00/10/00/00/00/00/00/00/00/00/01/10/01/01/10/01/10/00/00/00/00/00/00/01/10/01/00/01/00/00/11/10/01/10/01/10/00/00/00/00/00/10/01/00/00/00/00/01/10/00/00/01/10/00/00/00/00/01/01/00/00/01/10/00/00/00/00/00/00/01/10/00/00/00/00/00/00/01/11/10/00/00/11/00/10/01/11/01/01/00/00/01/00/00/00/00/00/00/00/00/00/01/11/10/00/01/11/10/01/11/00/00/00/01/01/01/10/00/01/00/01/10/01/10/00/01/10/00/00/01/10/00/0
chr3L19916907.TG.PASSAC=66GT0/01/01/00/10/00/00/00/00/01/01/10/00/01/10/10/01/00/00/00/01/01/10/00/00/00/00/00/01/10/01/00/00/00/01/10/00/00/00/00/00/00/00/00/01/10/00/01/11/01/00/00/00/00/01/10/01/10/00/01/00/00/01/00/00/00/01/00/00/00/00/00/00/00/10/00/00/00/00/00/00/00/00/01/10/01/01/10/01/10/00/00/00/00/00/00/01/10/01/00/01/00/01/01/10/01/10/01/10/00/00/00/00/00/10/01/00/00/00/00/01/10/00/00/01/00/00/00/00/00/01/01/00/00/01/00/00/00/00/00/00/00/01/10/00/00/00/00/00/00/01/11/00/00/00/11/00/10/01/11/01/01/00/00/01/00/00/00/00/00/00/00/00/00/01/11/10/00/01/11/10/01/11/00/00/00/01/01/01/10/00/01/10/01/10/01/10/00/01/10/00/00/01/10/00/0
chr3L19917475.AG.PASSAC=130GT1/11/11/11/01/01/10/00/01/11/11/11/10/01/11/01/11/11/10/01/00/01/10/01/11/10/00/00/11/10/01/11/11/11/11/10/01/10/00/00/00/01/10/00/01/11/11/11/11/11/11/11/10/00/01/10/01/11/01/11/11/10/01/11/01/10/01/10/00/00/01/10/00/01/11/10/00/00/00/01/11/10/00/01/10/01/11/11/10/00/01/11/11/10/00/00/01/10/01/11/11/11/11/11/10/01/10/01/11/11/10/00/01/11/01/11/10/00/01/10/01/11/11/10/01/11/11/11/11/11/11/01/11/11/11/10/01/10/00/00/01/10/01/10/00/00/00/00/00/01/11/11/10/00/00/11/11/10/01/11/11/11/00/01/11/10/01/11/10/00/00/00/00/00/11/11/10/10/01/11/10/11/11/10/01/10/01/11/01/00/01/11/10/01/11/11/11/11/11/11/11/00/01/10/00/1
chr3L19917079.CT.PASSAC=107GT1/11/11/10/11/11/10/01/10/01/11/11/10/01/11/01/11/11/10/00/01/11/10/00/00/01/10/01/00/01/11/10/01/10/01/10/01/10/01/10/00/00/01/10/01/10/01/10/00/01/10/00/00/00/01/10/01/11/00/01/10/00/11/10/00/00/01/10/00/00/00/00/00/01/11/00/01/11/10/00/01/10/01/11/10/00/01/10/01/10/01/10/00/00/01/11/11/11/11/10/01/00/01/01/10/01/10/01/11/11/10/00/01/11/00/01/11/11/10/00/01/11/11/11/10/01/11/10/01/10/00/11/11/11/11/10/00/01/10/00/10/00/00/00/00/00/00/00/00/01/11/11/10/00/00/11/01/00/01/10/01/11/11/10/01/10/00/00/00/00/00/01/10/00/11/11/10/10/00/01/11/10/01/10/00/01/10/01/11/10/01/11/10/01/10/01/10/00/01/11/10/10/01/10/00/0
chr3L19916830.AC.PASSAC=122GT1/11/11/10/11/11/10/01/10/01/11/11/10/01/11/11/11/11/10/00/01/11/10/00/00/01/10/00/11/11/11/10/01/10/01/10/01/10/01/10/00/00/01/10/01/10/01/11/11/11/10/00/01/10/01/10/01/11/10/01/10/01/01/10/00/00/01/10/00/00/00/01/10/01/11/00/01/11/10/01/11/10/01/11/10/01/11/10/01/10/01/10/00/00/01/11/11/11/11/10/01/00/01/01/10/01/00/01/11/11/10/00/01/10/10/01/11/11/10/01/11/11/11/11/11/11/11/11/11/10/01/01/11/11/11/10/00/01/10/00/10/00/00/01/10/00/00/00/00/01/11/11/10/00/00/11/10/10/01/11/11/11/11/10/01/10/00/00/00/00/00/01/10/00/11/11/10/10/01/11/11/11/11/10/00/01/11/11/11/10/01/11/10/01/10/01/10/00/01/11/10/10/01/10/00/0

Sequences and list of disrupted MOTIFs around top 5 SNPs

ChrPositionSequenceMotifs
chr3L19916906CACCCTATTCCGAACAAACACCTGCTGTATCTAAACCAAAATGGACAAGAADmelanogaster-FlyFactorSurvey-ac_da_SANGER_5_FBgn0000022 , Dmelanogaster-FlyFactorSurvey-ac_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-amos_da_SANGER_10_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-amos_da_SANGER_10_FBgn0003270 , Dmelanogaster-FlyFactorSurvey-ase_da_SANGER_10_FBgn0000137 , Dmelanogaster-FlyFactorSurvey-ase_da_SANGER_10_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-CG12605_SANGER_10_FBgn0035481 , Dmelanogaster-FlyFactorSurvey-CG12605_SOLEXA_5_FBgn0035481 , Dmelanogaster-FlyFactorSurvey-CG17181_SANGER_5_FBgn0035144 , Dmelanogaster-FlyFactorSurvey-CG17181_SOLEXA_5_FBgn0035144 , Dmelanogaster-FlyFactorSurvey-dei_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-dei_da_SANGER_5_FBgn0008649 , Dmelanogaster-FlyFactorSurvey-esg_SANGER_2.5_FBgn0001981 , Dmelanogaster-FlyFactorSurvey-HLH54F_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-HLH54F_da_SANGER_5_FBgn0022740 , Dmelanogaster-FlyFactorSurvey-l(1)sc_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-l(1)sc_da_SANGER_5_FBgn0002561 , Dmelanogaster-FlyFactorSurvey-net_da_SANGER_10_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-net_da_SANGER_10_FBgn0002931 , Dmelanogaster-FlyFactorSurvey-sc_da_SANGER_10_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-sc_da_SANGER_10_FBgn0004170 , Dmelanogaster-FlyFactorSurvey-scrt_SANGER_2.5_FBgn0004880 , Dmelanogaster-FlyFactorSurvey-scrt_SOLEXA_2.5_1_FBgn0004880 , Dmelanogaster-FlyFactorSurvey-scrt_SOLEXA_2.5_2_FBgn0004880 , Dmelanogaster-FlyFactorSurvey-sna_SANGER_10_FBgn0003448 , Dmelanogaster-FlyFactorSurvey-sna_SOLEXA_5_FBgn0003448 , Dmelanogaster-FlyFactorSurvey-wor_SANGER_2.5_FBgn0001983 , Dmelanogaster-FlyFactorSurvey-wor_SOLEXA_2.5_FBgn0001983
chr3L19916907ACCCTATTCCGAACAAACACCTGCTGTATCTAAACCAAAATGGACAAGAAGDmelanogaster-FlyFactorSurvey-amos_da_SANGER_10_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-amos_da_SANGER_10_FBgn0003270 , Dmelanogaster-FlyFactorSurvey-CG17181_SOLEXA_5_FBgn0035144 , Dmelanogaster-FlyFactorSurvey-da_SANGER_10_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-HLH4C_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-HLH4C_da_SANGER_5_FBgn0011277 , Dmelanogaster-FlyFactorSurvey-HLH54F_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-HLH54F_da_SANGER_5_FBgn0022740 , Dmelanogaster-FlyFactorSurvey-nau_da_SANGER_5_FBgn0000413 , Dmelanogaster-FlyFactorSurvey-nau_da_SANGER_5_FBgn0002922 , Dmelanogaster-FlyFactorSurvey-scrt_SANGER_2.5_FBgn0004880
chr3L19917475TGGCGGCGGCCATGCAGTAAATAAAGCATTTACCCCCGCATACATCTAATTDmelanogaster-FlyFactorSurvey-CG4404_SANGER_5_FBgn0030432 , Dmelanogaster-FlyFactorSurvey-fru_SOLEXA_5_FBgn0004652
chr3L19917079TGTATGTACTTTTAACTTCATGCACAGCCTGCTTGAAGATGGTGAAGCAGC
chr3L19916830GCACGGTTTATTCACATGCAAAAGACGAAATTTAGTTAAAATTATTAGCAADmelanogaster-FlyFactorSurvey-Eip93F_SANGER_10_FBgn0013948