CAGE unzoomed image plots. Signal is filtered exactly as in QTL calling (i.e. removing mappability issues). In these image plots, each column represents a base pair centered on the strongest signal while each row represents an individual. Individuals are sorted by the genotype of the strongest associated SNP. Colors on the left of the image indicate genotype of the individual. Top and bottom panels represent signal on opposite strands. Intensity of CAGE signal is displayed on a log scale where more white indicates more CAGE signal."
"From left to right: chrX_7627909_7628932_CAGE_geneheatmap_byMinCommonP_nozoom_1012h chrX_7627909_7628932_CAGE_geneheatmap_byMinCommonP_nozoom_24h chrX_7627909_7628932_CAGE_geneheatmap_byMinCommonP_nozoom_68h