A conserved role for Snail as a potentiator of active transcription

Rembold M*, Ciglar L*, Yáñez-Cuna JO, Zinzen RP, Girardot C, Jain A, Welte MA, Stark A, Leptin M‡, Furlong EE‡
Genes Dev.
Read it on: Europe PMC | DOI: 10.1101/gad.230953.113

Data

All coordinates are relative to the dm3 assembly.

We provide the ChIP-chip signal i.e. log2(IP/Mock), for each transcription factor and developmental time used in this study. The signal is provided as bigwig files:

The Twist dataset is from Zinzen et al., 2009 – reprocessed with dm3.

Snail (sna) at 2-4 hours
Twist (twi) at 2-4 hours

We also provide the expression profiling result tables for both developmental time used:

Stage 5
Stage 7

Raw data is available at ArrayExpress:

Accession E-TABM-1589 ChIP-chip sna at 2-4h
Accession E-TABM-1598 Gene expression profiling time course of Snail mutants