Enhancer–promoter interactions become more instructive in the transition from cell-fate specification to tissue differentiation

Pollex T, Rabinowitz A, Gambetta MC, Marco-Ferreres R, Viales RR, Jankowski A, Schaub C, Furlong EEM
Nature Genetics 2024, 2024 Mar
Read it on: Nature Genetics | DOI: 10.1038/s41588-024-01678-x

Data

Hide data

We provide bigwigs for Chip-Seq of insulators

Whole Embryo 2-3h:

WE_2-3h_BEAF.bigwig
WE_2-3h_CTCF.bigwig
WE_2-3h_H3K27ac.bigwig
WE_2-3h_SuHw.bigwig

Elav (developing and differentiating neurons) 6-8h:

elav_6-8h_BEAF.bigwig
elav_6-8h_CTCF.bigwig
elav_6-8h_H3K27ac.bigwig
elav_6-8h_SuHw.bigwig

Mef2 (myoblast/muscle cells) 6-8h:

Mef2_6-8h_BEAF.bigwig
Mef2_6-8h_CTCF.bigwig
Mef2_6-8h_H3K27ac.bigwig
Mef2_6-8h_SuHw.bigwig

Elav (developing and differentiating neurons) 10-12h:

elav_10-12h_BEAF.bigwig
elav_10-12h_CTCF.bigwig
elav_10-12h_H3K27ac.bigwig
elav_10-12h_SuHw.bigwig

Mef2 (myoblast/muscle cells) 10-12h:

Mef2_10-12h_BEAF.bigwig
Mef2_10-12h_CTCF.bigwig
Mef2_10-12h_H3K27ac.bigwig
Mef2_10-12h_SuHw.bigwig

Raw data are available at ArrayExpress:

E-MTAB-9310 – Tissue- and stage-specific Capture-C
E-MTAB-12639 – Tissue- and stage-specific Chip-Seq