Seyres D, Ghavi-Helm Y*, Junion G*, Taghli-Lamallem O, Guichard C, Röder L, Girardot C, Furlong EE‡ and Perrin L‡
Development, 143(23):4533-4542.
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Europe PMC | DOI:
10.1242/dev.140822
Data
All coordinates are relative to the dm3 assembly
We provide the BiTS ChIP-seq signal as bigwig files, in three formats (50bp resolution (as in the publication screenshots), recomputed at a higher 1bp resolution, and the optimal peak set from the IDR analysis) for two chromatin modifications (H3K27ac, H3K4me3), in BiTS purified cardiomyocyte nuclei from Drosophila embryos at 10-13h after egg-laying (AEL). We also provide RNA-seq signal (two independent replicates), of FACS purified cardiomyocytes from Drosophila embryos at 10-13h AEL:-
- ChIP-seq data:
- K27ac signal (recomputed – 1bp res) 1X depth normalised, input background subctracted (bigwig file)
- K4me3 signal (recomputed – 1bp res) 1X depth normalised, input background subctracted (bigwig file)
- K27ac signal (from publication – 50bp res) 1X depth normalised, input background subctracted (bigwig file)
- K4me3 signal (from publication – 50bp res) 1X depth normalised, input background subctracted (bigwig file)
- K27ac IDR5% optimal peaks set (narrowPeak file)
- K4me3 IDR5% optimal peaks set (narrowPeak file)
- ChIP-seq data:
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- RNA-seq data:
- RNA-seq signal in FACS purified cardiomyocytes (Replicate 1) RPKM normalised (bigwig file)
- RNA-seq signal in FACS purified cardiomyocytes (Replicate 2) RPKM normalised (bigwig file)
- RNA-seq data: