The degree of enhancer or promoter activity is reflected by the levels and directionality of eRNA transcription

Mikhaylichenko O*, Bondarenko V*, Harnett D, Schor IE, Males M, Viales RR, Furlong EE
* These authors contributed equally to this work.
Genes Dev. 32(1):42-57.
Read it on: Europe PMC | DOI: 10.1101/gad.292870.116

Data

All coordinates are relative to the dm3 assembly

We provide the whole embryo PRO-cap strand specific signal at 3-4h and 6-8h after egg laying (AEL):

PROcap_3-4h_whole-embryo_minus-strand.bigwig
PROcap_3-4h_whole-embryo_plus-strand.bigwig
PROcap_6-8h_whole-embryo_minus-strand.bigwig
PROcap_6-8h_whole-embryo_plus-strand.bigwig

and the strand specific mesoderm CAGE-seq signal data at 6-8h AEL:

CAGEseq_6-8h_S56_mesoderm_rpkm_minus-strand.bigwig
CAGEseq_6-8h_S56_mesoderm_rpkm_plus-strand.bigwig

Raw data is available at ArrayExpress:

Accession E-MTAB-6154 — PRO-cap-Seq at two embryonic time points during embryogenesis in Drosophila melanogaster
Accession E-MTAB-6159 — CAGE-Seq during Drosophila melanogaster embryogenesis at 6-8h after egg laying in mesoderm.