All coordinates are relative to the dm3 assembly
We provide the Supplementary Tables and convenient media produced for Schor et al. 2017. Please refer to our Supplementary Tables description material
[ / ]
Importantly, the furlong lab hosts an interactive HTML table containing relevant plots and information about all significant associations found with the joint model. Detailed information for each region is accessible by clicking on the relevant location hyperlink in the Window column. (Access the detailed description of the table).
Additionally, we provide tables (tab-delimited files) for each window with the raw p-values for all variants. We included all windows with a significant association for the multi-trait 3PC (all time-points together, first 3 principal components as phenotype), i.e. all those included in Supplementary Table 2. We provide two compressed files, which contain all tables:
- 3PC: p-values resulting from the multi-trait 3PC model (all time-points together, first 3 principal components as phenotype)
- Mean: p-values resulting from the multi-trait Mean model for the same windows as with the 3PC model (all time-points together, mean CAGE signal as phenotype)
Both tables contain, besides chromosome and position of all tested variants, the p values for the common effect and the time-specific terms.
Raw data is available at ArrayExpress: